MIAME/Plant – adding value to plant microarrray experiments.

MIAME/Plant – adding value to plant microarrray experiments.

biological interpretation of the right of call microarray experimental data for the relevant explanations. MIAME guidelines that are widely accepted give, organism-independent standard generic for minimum information about microarray experiments. In the overall structure, MIAME very common and specification covers most of the aspects of technical, while the specific relevant organisms useful for understanding the underlying experiment is mostly gone. If the plant biologists want to use the results of microarray experiments published, they need detailed information about the biological aspects, such as the growing conditions, time of harvest, or harvest the organ (s). Here, we propose MIAME / Plants, standard describes the biological details that will be taken to describe microarray experiments involving plants.

We hope that a more detailed explanation and a more systematic microarray experiments will greatly increase the use of transcriptome data sets for the scientific community. The strength and value of systematic explanation convincing microarray data indicated by the data warehouse as Genevestigator (R) or NASCArrays and better experimental explanation will make this application even more powerful.
The technology reduces the cost of high-throughput functional genomics is creating a flood of high-volume, complex data, puts a strain on resources and the development of bioinformatics tools.

The Bacterial Microarray Group at St George (BμG @ S) has been at the forefront of design microarray bacteria and analysis for more than a decade and while serving as the hub of a global network of research groups of microbes have developed BμG @ Sbase, microbial genes expression and databases comparative genomics. BμG @ Sbase is a web-browsable, expertly curated, MIAME-compliant database that stores a comprehensive explanation of experimental and some raw and analyzed data format. consistent explanation is activated through a series of structured web form, which guides the user through the process follows a set of best practices and controlled vocabulary.

The database currently contains 86 expert curated set of data available to the public (with over 124 yet published) and get a full explanation for the 59 bacterial microarray design. The data can be accessed and queried using the explorer-like interface; integrates an intuitive tree diagram for an experimental compound is present clear and concise details. Furthermore, the modular design of the database will provide a strong platform to integrate other data types beyond the microarray to be more future analysis system based on.

 MIAME/Plant - adding value to plant microarrray experiments.
MIAME/Plant – adding value to plant microarrray experiments.

THEME: web tool for the analysis of microarray design loop data.

A number of recent studies have shown that loop-design that is more efficient than the reference control design. Data analysis for loop-designed microarray experiments is generally performed using a linear model and statistical tests.

This technique requires specialized knowledge in statistical programming. However, limited-loop web-based design tool available. We have developed THEME (Tsing Hua Engineering from microarray experiments) that exploits all the necessary data analysis tools for microarray study-design loop. TEMA allows users to build linear models and to apply some user-defined statistical test to detect DEG hypothesis (which is expressed differently genes).

AlbuVoid Buffer Kit - 1000

AVBK-1000 1000 mL
EUR 1166.00
Description: Albuvoid™ Buffer

HemoVoid Buffer Kit - 1000

HVBK-1000 1000 mL
EUR 1166.00
Description: HemoVoid™ Buffer

UPCK Buffer Kit - 1000

UPBK-1000 1000 mL
EUR 1166.00
Description: UPCK™ Buffer

Caspase-8 IETD-R110 Fluorometric HTS Assay Kit

30012-3 1KIT
EUR 1627.00
Description: Minimum order quantity: 1 unit of 1KIT

Steady-Luc Firefly HTS Assay Kit (10x100 ml)

30028-3 1KIT
EUR 3145.00
Description: Minimum order quantity: 1 unit of 1KIT

Recombinant Human Apo-SAA1 Protein

PROTP0DJI8-3 50ug
EUR 317.00
Description: Serum amyloid A proteins (SAA) represents a family of apolipoproteins that circulates in association with high-density lipoproteins (HDL). The level of apo-SAA, normally 1-5 μg/ml in plasma, increases 500-1000 fold within 24 hours of an inflammatory stimulus and, under these conditions, is the most abundant HDL apo-lipoprotein. The human SAA gene codes for a 122 amino acid nonglycosylated polypeptide, which contains an 18 amino acid N-terminal sequence. Recombinant human apo-SAA1 is an 11.7 kDa protein containing 105 amino acid residues.

Apo-SAA, human recombinant

4324-1000
EUR 920.00

Apo-D, human recombinant

4326-1000
EUR 8532.00

Human Apo Transferrin

7-04408 500mg Ask for price

Human Apo Transferrin

7-04409 1gram Ask for price

Human Apo Transferrin

7-04410 5grams Ask for price

Bovine Apo Transferrin

7-04411 500mg Ask for price

Bovine Apo Transferrin

7-04412 1gram Ask for price

Bovine Apo Transferrin

7-04413 5grams Ask for price

Meat sample spatulas (individually wrapped) 1000/pk

MSSW-1000 1 pk
EUR 152.00

Recombinant Human Lactoferrin Apo

7-05515 10mg Ask for price

Recombinant Human Lactoferrin Apo

7-05517 1gram Ask for price

Recombinant Human Lactoferrin Apo

7-05516 100mg Ask for price

C-Series 1000 Analyzer Software

S02-AAH-CYT-1000 CD
EUR 271.00

Shields for Mag(net)ic Wand - 1000

SHIELD-MW1-1000 1000pack
EUR 113.00
Description: Shields for Shields for Mag(net)ic Wand, pack of 1000.

IL-7 Interleukin-7 Human Recombinant Protein, Yeast

PROTP13232-3 Regular: 10ug
EUR 317.00
Description: Interleukin-7 Human Recombinant produced in yeast is a single, glycosylated polypeptide chain containing 152 amino acids and having a molecular mass of 17.4 kDa. The IL-7 is purified by proprietary chromatographic techniques.

BMP-7 Bone Morphogenetic Protein-7 Human Recombinant Protein

PROTP18075-3 Regular: 10ug
EUR 317.00
Description: Bone Morphogenetic Protein-7 Human Recombinant produced in E.Coli is a monomeric, non-glycosylated, polypeptide chain containing 139 amino acids and having a molecular mass of 15679.97 Dalton. ;The BMP-7 is purified by proprietary chromatographic techniques.

Disposable Meat Sample Plastic tubes with caps (5 ml) (1000/pk)

MST5-1000 1 pk
EUR 286.00

Recombinant Human APO-D GST Tag

7-00103 2µg Ask for price

Recombinant Human APO-D GST Tag

7-00104 5µg Ask for price

Recombinant Human APO-D GST Tag

7-00105 10ug Ask for price

Mouse anti-dsDNA IgG3-specific ELISA Kit, 96 tests, Quantitative

5120-3 1 kit
EUR 712.00

Trypsin/Chrmotrypsin Complex 1000:1000

T6788 1g
EUR 76.10
  • Product category: Proteins/Enzymes/Proteases

Horse spleen Apo-ferritin purified, ELISA grade

FERT19-R-1000 1 mg
EUR 225.00

Recombinant Human Serum Amyloid A (APO-SAA1)

7-01547 50µg Ask for price

Recombinant Human Serum Amyloid A (APO-SAA1)

7-01548 1mg Ask for price

Recombinant Human Serum Amyloid A (APO-SAA1)

7-01546 10µg Ask for price

DNA Binding Protein-7 (DBP-7), human recombinant

7603-1000
EUR 3258.00

rHu IL-7

AK8285-1000 1mg Ask for price

Recombinant Rhesus Macaque Serum Amyloid A (APO-SAA1)

7-01551 1mg Ask for price

Recombinant Rhesus Macaque Serum Amyloid A (APO-SAA1)

7-01549 2µg Ask for price

Recombinant Rhesus Macaque Serum Amyloid A (APO-SAA1)

7-01550 10µg Ask for price

NCX 1000

HY-U00023 10mg
EUR 1455.00

EZSolution? 7-Aminoactinomycin D

2727-1000
EUR 251.00

IL-7, human recombinant

4146-1000
EUR 5433.00

IL-7, murine recombinant

4147-1000
EUR 5705.00

IL-7, rat recombinant

4148-1000
EUR 5106.00

BMP-7, human recombinant

4579-1000
EUR 4563.00

Galectin-7, human recombinant

4647-1000
EUR 3078.00

FGF-7/KGF, human recombinant

4050-1000
EUR 5106.00

Hamster Serum Antibody detection ELISA kit, Qualitative (sufficient for 500-1000 tests)

80180 1 kit
EUR 651.00

Pig Interleukin-7 (IL-7) ELISA Kit, 96 tests, Quantitative

9990 1 Kit
EUR 773.00

Anti-CK7 (Cytokeratin-7) Rabbit Monoclonal Antibody, Clone#RM284

M02416-3 100uL
EUR 385.00
Description: Anti-CK7 (Cytokeratin-7) Rabbit Monoclonal Antibody, Clone#RM284 tested in WB, IHC, reactive to Human

Fraction V BSA powder, pH 7

BAC62-1000 1KG
EUR 845.00
  • Fraction V BSA powder, pH 7 is indicated as RUO. Do not use on humans.

BMP-12/GDF-7, human recombinant

4572-1000
EUR 4220.00

1000UL GEN3 MULTI-BARRIER FILTER TIPS,STERILE,1000/5000

GEN3-1000-L-R-S 1000/pk
EUR 310.00
Description: Filter Tip; Maximum Recovery Filter Tips - Axygen

Anti-Cytokeratin 7

DB051RTU-7 7 ml
EUR 204.00
Description: rabbit monospecific clonal antibodies for ihc-p application; prediluted (ready to use)

TC-G 1000

B7730-10 10 mg
EUR 340.00

TC-G 1000

B7730-50 50 mg
EUR 1276.00

Polyethylene glycol 1000

GC0081-100G 100 g
EUR 46.00

ScaI unit: 1000

YRSCA1 1 vial Ask for price

Caspase-3 DEVD-R110 Fluorometric HTS Assay Kit

30009-1 1KIT
EUR 100.00
Description: Minimum order quantity: 1 unit of 1KIT

Caspase-3 DEVD-R110 Fluorometric HTS Assay Kit

30009-2 1KIT
EUR 226.00
Description: Minimum order quantity: 1 unit of 1KIT

Human Apolipoprotein B (Apo B) AssayMax ELISA Kit (Positive Control included)

EA7001-7 96 Well Plate
EUR 455.00

Human Apolipoprotein E (Apo E) AssayMax ELISA Kit (Positive Control included)

EA8003-7 96 Well Plate
EUR 455.00

Potassium chloride 3 M, 1000 ml

12-9176-5 1000 ml
EUR 130.00

Sodium chloride 3 M, 1000 ml

12-9190-5 1000 ml
EUR 88.00

Human IgE (myeloma, Kappa), purified (isotype control)

20007-3-1000 1000 ug
EUR 2973.00

SPINX INSERT,NO MEMBRANE,NS,BK,1000/BAG/1000

9301 1000/pk
EUR 251.00
Description: Spin-X; Spin-X - OEM

GEL CARRYING TRAY FOR GD-1000 AND GDBL-1000

GD-GCT 1/pk
EUR 207.00
Description: Lab Equipment; Axygen Branded EQ

Human Apolipoprotein A-I (Apo A1) AssayMax ELISA Kit (Positive Control included)

EA5201-7 96 Well Plate
EUR 455.00

Human Apolipoprotein A-II (Apo A2) AssayMax ELISA Kit (Positive Control included)

EA5222-7 96 Well Plate
EUR 455.00

Human Apolipoprotein A-I (Apo A1) AssayMax ELISA Kit (Positive Control included)

EA5301-7 96 Well Plate
EUR 455.00

Human Apolipoprotein H (Apo H, B2GP1) AssayMax ELISA Kit (Positive Control included)

EA8821-7 96 Well Plate
EUR 477.00

Recombinant Human Galectin-7

7-00444 1mg Ask for price

Recombinant Human Interleukin-7

7-00895 2µg Ask for price

Recombinant Human Interleukin-7

7-00896 10µg Ask for price

Recombinant Human Interleukin-7

7-00897 1mg Ask for price

Recombinant Mouse Interleukin-7

7-00904 2µg Ask for price

Recombinant Mouse Interleukin-7

7-00905 10µg Ask for price

Recombinant Mouse Interleukin-7

7-00906 1mg Ask for price

Recombinant Human Kallikrein-7

7-03034 2µg Ask for price

Recombinant Human Kallikrein-7

7-03035 10µg Ask for price

Recombinant Human Kallikrein-7

7-03036 100µg Ask for price

Recombinant ProMatrix Metalloproteinase-7

7-03478 5µg Ask for price

Recombinant ProMatrix Metalloproteinase-7

7-03479 20µg Ask for price

Recombinant ProMatrix Metalloproteinase-7

7-03480 1mg Ask for price

Recombinant Human Galectin-7

7-00442 2µg Ask for price

Recombinant Human Galectin-7

7-00443 10µg Ask for price

Individual Reaction Mix 7

G065-7 200 reactions
EUR 167.00

Fraction V BSA powder, protease free, pH 7

BAC65-1000 1KG
EUR 877.50
  • Fraction V BSA powder, protease free, pH 7 is indicated as RUO. Do not use on humans.

Standard grade heat shock BSA powder, pH 7

BAH62-1000 1KG Ask for price
  • Standard grade heat shock BSA powder, pH 7 is indicated as RUO. Do not use on humans.

Human Serum IgG3 detection and titration ELISA kit, Qualitative (sufficient for 500-1000 tests)

80170-G3 1 kit
EUR 651.00

Human Serum IgG4 detection and titration ELISA kit, Qualitative (sufficient for 500-1000 tests)

80170-G4 1 kit
EUR 651.00

Human Serum IgM detection and titration ELISA kit, Qualitative (sufficient for 500-1000 tests)

80170-M 1 kit
EUR 651.00

Human Bone Morphogenic Protein 7 (BMP-7) ELISA Kit, 96 tests, Quantitative

100-190-B7H 1 Kit
EUR 834.00

Apo-E4/ Rat Apo- E4 ELISA Kit

ELA-E1858r 96 Tests
EUR 886.00

apo-B100/ Rat apo- B100 ELISA Kit

ELA-E0603r 96 Tests
EUR 886.00

apo-A1/ Rat apo- A1 ELISA Kit

ELA-E0604r 96 Tests
EUR 886.00

Apo-E/ Rat Apo- E ELISA Kit

ELA-E0704r 96 Tests
EUR 886.00

Recombinant Human Interleukin-7, Saccharomyces

7-00898 2µg Ask for price

Recombinant Human Interleukin-7, Saccharomyces

7-00899 10µg Ask for price

Recombinant Human Interleukin-7, Saccharomyces

7-00900 1mg Ask for price

Recombinant Human Matrix Metalloproteinase-7

7-03154 5µg Ask for price

Recombinant Human Matrix Metalloproteinase-7

7-03155 20µg Ask for price

Recombinant Human Matrix Metalloproteinase-7

7-03156 1mg Ask for price

PBS Tablets (1000 ml)

2129-10
EUR 164.00

PBS Tablets (1000 ml)

2129-100
EUR 637.00

1000 G HEPES, POWDER

61-034-RR 1000 g/pk
EUR 285.00
Description: Media Catalog; Cell Culture Reagents

Bgl I unit: 1000

YRBGL1 1 vial Ask for price

EcoO109 I unit: 1000

YRECOO109 1 vial Ask for price

Mlu I unit: 1000

YRMLU1 1 vial Ask for price

Human Apolipoprotein A-II (Apo A2) AssayMax ELISA Kit (High Sensitivity) (Positive Control included)

EA5333-7 96 Well Plate
EUR 455.00

3?-dA CPG 1000 A (?10 grams)

AHP-CH-DACPG10 per gram Ask for price
    • Product line: Standard DNA Synthesis CPG
    • Brand:

3?-dC CPG 1000 A (?10 grams)

AHP-CH-DCCPG10 per gram Ask for price
    • Product line: Standard DNA Synthesis CPG
    • Brand:

3?-dG CPG 1000 A (?10 grams)

AHP-CH-DGCPG10 per gram Ask for price
    • Product line: Standard DNA Synthesis CPG
    • Brand:

3?-dT CPG 1000 A (?10 grams)

AHP-CH-DTCPG10 per gram Ask for price
    • Product line: Standard DNA Synthesis CPG
    • Brand:

Human Primary Antibody (IgA) detection and titration ELISA kit, Qualitative (sufficient for 500-1000 tests)

80170-A 1 kit
EUR 651.00

Human Primary Antibody (IgE) detection and titration ELISA kit, Qualitative (sufficient for 500-1000 tests)

80170-E 1 kit
EUR 651.00

Human Primary Antibody (IgG1) detection and titration ELISA kit, Qualitative (sufficient for 500-1000 tests)

80170-G1 1 kit
EUR 651.00

Human Primary Antibody (IgG2) detection and titration ELISA kit, Qualitative (sufficient for 500-1000 tests)

80170-G2 1 kit
EUR 651.00

Mouse Primary Antibody (IgG1-3) detection and titration and titration ELISA kit, Qualitative (sufficient for 500-1000 tests)

80150-G 1 kit
EUR 651.00

Human apo-Serum Amyloid A1 (apo-SAA1) Protein

abx670232-50ug 50 ug
EUR 565.00
  • Shipped within 1 week.

Recombinant Human Parkinson Disease Protein 7

7-05800 5µg Ask for price

Recombinant Human Parkinson Disease Protein 7

7-05802 1mg Ask for price

Recombinant Toxoplasma Gondii P29 (GRA 7)

7-07543 100µg Ask for price

Recombinant Toxoplasma Gondii P29 (GRA 7)

7-07545 1000µg Ask for price

Recombinant Human Calcium Binding Protein 7

7-04639 1µg Ask for price

Recombinant Human Calcium Binding Protein 7

7-04640 5µg Ask for price

Recombinant Human Calcium Binding Protein 7

7-04641 50µg Ask for price

Recombinant Human Nuclear Import 7 Homolog

7-05707 5µg Ask for price

Recombinant Human Nuclear Import 7 Homolog

7-05708 25µg Ask for price

Recombinant Human Nuclear Import 7 Homolog

7-05709 1mg Ask for price

Recombinant Human Parkinson Disease Protein 7

7-05801 20µg Ask for price

Recombinant Toxoplasma Gondii P29 (GRA 7)

7-07544 500µg Ask for price

Recombinant Human Bone Morphogenetic protein-7

7-00184 2µg Ask for price

Recombinant Human Bone Morphogenetic protein-7

7-00186 1mg Ask for price

Recombinant Human Galectin-7 His Tag

7-00446 20µg Ask for price

Recombinant Human Galectin-7 His Tag

7-00447 1mg Ask for price

Recombinant Human Interleukin-7, His Tag

7-00901 2µg Ask for price

Recombinant Human Interleukin-7, His Tag

7-00902 10µg Ask for price

Recombinant Human Interleukin-7, His Tag

7-00903 1mg Ask for price

Recombinant Human Retinol Binding Protein-7

7-01543 5µg Ask for price

Recombinant Human RNA (guanine-7-) Methyltransferase

7-03547 /2µg Ask for price

Recombinant Human RNA (guanine-7-) Methyltransferase

7-03548 10µg Ask for price

Recombinant Human RNA (guanine-7-) Methyltransferase

7-03549 1mg Ask for price

Recombinant Human Bone Morphogenetic protein-7

7-00185 10µg Ask for price

Recombinant Human Galectin-7 His Tag

7-00445 5µg Ask for price

Recombinant Human Retinol Binding Protein-7

7-01544 20µg Ask for price

Recombinant Human Retinol Binding Protein-7

7-01545 1mg Ask for price

Recombinant Human Parathyroid Hormone (7-34)

7-02317 100µg Ask for price

Recombinant Human Parathyroid Hormone (7-34)

7-02318 500µg Ask for price

Recombinant Human Parathyroid Hormone (7-34)

7-02319 1mg Ask for price

Apo AI Protein

abx069751-100ug 100 ug
EUR 2235.00
  • Shipped within 5-10 working days.

Apo AII Protein

abx069752-05mg 0.5 mg
EUR 384.00
  • Shipped within 5-10 working days.

Apo E Protein

abx069753-005mg 0.05 mg
EUR 467.00
  • Shipped within 5-10 working days.

Apo H Protein

abx069757-1mg 1 mg
EUR 1295.00
  • Shipped within 5-10 working days.

Apo (a) antibody

20-AG73 10 ml
EUR 246.00
Description: Goat polyclonal Apo (a) antibody

Apo SAA antibody

20R-1792 100 ug
EUR 673.00
Description: Rabbit polyclonal Apo SAA antibody

Users can modify the entries of the matrix design for experimental design and contrasting matrix for statistical hypothesis testing. Output of some user-defined statistical test hypotheses, register DEG, can be cross-validated. Web platform provides an assessment of data and visualization tools that significantly help users when evaluating the performance of microarray experimental procedure. TEMA also MIAME (Minimum Information About Microarray Experiment) compliant system, which allows users to export files formatted for GEO (Gene Expression Omnibus) filing.

Trevor

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